File conversion utilities

MagicTools provides few file conversion utilities: [tpr2mmol]tpr2mmol, [xmol2gro]xmol2gro, [gro2xmol]gro2xmol, [xmol2gro]xmol2gro, [dcd2xtc]dcd2xtc

In addition to this, we recommend to use python library MDtraj and it's command-line interface called mdconvert, which is versatile file conversion tool for almost any kind of MD trajectory.

Another useful tool, which is related to trajectory files is [GetStartConfs]GetStartConfs, which makes a set of starting configurations for MagiC core from existing bead mapped trajectory.